Duration of Stay
Wednesday Jul 25 - Sunday. Jul. 29
2018:Lecture part I
2018:Lecture part II
Lab Material (not presented in class, but available for exploration)
2018: Tutorial slides
2018: Phybase manual
2018: MP-EST v.2.0 manual]
Degnan & Rosenberg (2009): An excellent review of the multispecies coalescent, including discussion of the anomaly zone
Liu et al. (2010): MP-EST: A maximum likelihood species tree method
Cloutier et al. (2018):  Whole-genome analyses resolve the phylogeny of flightless birds (Palaeognathae) in the presence of an empirical anomaly zone. bioRxiv 10.1101/262949.
Sackton et al. (2018):  Convergent regulatory evolution and the origin of flightlessness in palaeognathous birds. bioRxiv 10.1101/262584.
Hu, et al. (2018):  A hierarchical Bayesian model for detecting convergent rate changes of noncoding conserved elements on phylogenetic trees. bioRxiv 10.1101/260745.
Rheindt et al. (2014): An empirical example of using SNPs for phylogenetics