From MolEvol
Revision as of 10:25, 31 July 2014 by Liebeskind (talk | contribs) (For the lab)
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Arrival: 26 July 2014

Departure: 06 August 2014

Institutional home pages



Lecture Materials

Lecture slides (codon models) AND resources for the lab exercises (PAML demo) have been published to a small website. Please note that presentations may change up until the moment the lecture or lab begins. I will post modified PDFs after each talk.

Lecture page:

PAML demo:

The site contains some additional resources, including an extensive (but not exhaustive) reference list.

For the lab

Log into the cluster

   module load bioware
   cd 2014_Paml_lab

Plotting for Exercise 1

Excel: ColumnA --> Omegas ColumnB ---> lnL

Select both

Insert --> Charts --> Scatter (choose lines)

Right click on X-axis (omegas) --> Format Axis --> Logarithmic scale