Arrival: 26 July 2014
Departure: 06 August 2014
Institutional home pages
Lecture slides (codon models) AND resources for the lab exercises (PAML demo) have been published to a small website. Please note that presentations may change up until the moment the lecture or lab begins. I will post modified PDFs after each talk.
The site contains some additional resources, including an extensive (but not exhaustive) reference list.
For the lab
Log into the cluster
module load bioware
Plotting for Exercise 1
Excel: ColumnA --> Omegas ColumnB ---> lnL
Insert --> Charts --> Scatter (choose lines)
Right click on X-axis (omegas) --> Format Axis --> Logarithmic scale