Difference between revisions of "Divergence Times"

From MolEvol
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== Lecture ==  
 
== Lecture ==  
 
Bayesian methods for dating species divergences: [[media:WH_2013_lecture.pdf‎ | slides]] (#molevol2013 version)
 
Bayesian methods for dating species divergences: [[media:WH_2013_lecture.pdf‎ | slides]] (#molevol2013 version)
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== Lab Practical: Divergence time estimation using BEAST ==
 
== Lab Practical: Divergence time estimation using BEAST ==
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The detailed tutorial and data files can be found here: [http://treethinkers.org/divergence-time-estimation-using-beast/ http://treethinkers.org/divergence-time-estimation-using-beast/]  
 
The detailed tutorial and data files can be found here: [http://treethinkers.org/divergence-time-estimation-using-beast/ http://treethinkers.org/divergence-time-estimation-using-beast/]  
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=== Software ===
 
=== Software ===
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* [http://packages.python.org/DendroPy/ DendroPy] (*optional)
 
* [http://packages.python.org/DendroPy/ DendroPy] (*optional)
 
* [http://bodegaphylo.wikispot.org/starttree_program starttree] (*optional)
 
* [http://bodegaphylo.wikispot.org/starttree_program starttree] (*optional)
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== Optional Tutorials: Phylodynamics of Infectious Diseases ==
 
== Optional Tutorials: Phylodynamics of Infectious Diseases ==

Revision as of 07:36, 27 July 2013

IMG 1313.jpg

Course materials by Tracy Heath on Bayesian Divergence Time Estimation (2013).


Lecture

Bayesian methods for dating species divergences: slides (#molevol2013 version)


Lab Practical: Divergence time estimation using BEAST

Tutorial

The detailed tutorial and data files can be found here: http://treethinkers.org/divergence-time-estimation-using-beast/


Software


Optional Tutorials: Phylodynamics of Infectious Diseases

Many students are interested in Bayesian methods for understanding epidemiology. There are some great tools for applying these methods, including BEAST2: