Edwards lab notes

From MolEvol
Revision as of 16:46, 4 August 2014 by Ejmctavish (talk | contribs)

To start the lab:

[media:Edwards_Species_tree_lab_2014.pdf Tutorial here]

log into the cluster

   module load bioware

copy the lab exercise files to your home directory

  cp -r /class/molevol-shared/edwards_lab .
  cd edwards_lab

for each section of the tutorial, cd in the appropriate directory.

To run the software:


To install phybase in R:

  >install.packages("../molevol-software/phybase_a.tar.gz",repos = NULL, type="source")

Respond Y to the questions it will ask about installing locally.