Edwards lab notes
To start the lab:
log into the cluster. We will load the software we need using the command:
module load bioware
copy the lab exercise files to your home directory
wget https://molevol.mbl.edu/images/7/75/Edwards_species_tree_lab.zip unzip Edwards_species_tree_lab.zip
for each section of the tutorial, cd in the appropriate directory.
To invoke phybase in R on the cluster:
All commands after the '>' should be entered into R.
On your home machine download phybase from
and replace the path in the command above with your download location.