Difference between revisions of "RevBayes"

From MolEvol
(Phylogenetic Inference using RevBayes: Model Selection & Data Partitioning)
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RevBayes can be found on GitHub: https://github.com/revbayes/code
 
RevBayes can be found on GitHub: https://github.com/revbayes/code
  
This tutorial uses commit [https://github.com/revbayes/code/tree/1419c7e00ef23bf89d21040d431b023787863408 1419c7e00ef23bf89d21040d431b023787863408] on the [https://github.com/revbayes/code/tree/wh_tutorial wh_tutorial] branch.
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This tutorial uses the version at commit [https://github.com/revbayes/code/tree/1419c7e00ef23bf89d21040d431b023787863408 1419c7e00ef23bf89d21040d431b023787863408] on the [https://github.com/revbayes/code/tree/wh_tutorial wh_tutorial] branch.
  
 
=== Tutorial ===
 
=== Tutorial ===

Revision as of 11:52, 31 July 2014

Course materials by Tracy Heath, Michael Landis, and Sebastian Höhna on model selection and data partitioning in RevBayes


Lecture

Introduction to RevBayes slides are available on slideshare

Phylogenetic Inference using RevBayes: Model Selection & Data Partitioning

Source Code

RevBayes can be found on GitHub: https://github.com/revbayes/code

This tutorial uses the version at commit 1419c7e00ef23bf89d21040d431b023787863408 on the wh_tutorial branch.

Tutorial

The data files and Rev scripts can be found here: data files

From the course cluster download the data files:

wget https://molevol.mbl.edu/images/7/76/RB_BayesFactor_files.tar.gz

Uncompress the tutorial file directory:

tar xzf RB_BayesFactor_files.tar.gz

Navigate to the tutorial directory:

cd RB_tutorial_files

Add the RevBayes module:

module load revbayes

Execute RevBayes:

rb

The detailed lab practical document can be found here: tutorial PDF

Software