Difference between revisions of "RevBayes"

From MolEvol
(Source Code)
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RevBayes can be found on GitHub: https://github.com/revbayes/revbayes
 
RevBayes can be found on GitHub: https://github.com/revbayes/revbayes
  
This tutorial uses the version at commit [https://github.com/revbayes/revbayes/tree/1419c7e00ef23bf89d21040d431b023787863408 1419c7e00ef23bf89d21040d431b023787863408] on the [https://github.com/revbayes/code/tree/wh_tutorial wh_tutorial] branch.
 
  
 
=== Tutorial ===
 
=== Tutorial ===
The data files and Rev scripts can be found here: [[media:RB_BayesFactor_files.tar.gz | data files]]  
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The data files and Rev scripts can be found here: [[media:https://revbayes.github.io/tutorials.html | data files]]  
  
From the course cluster download the data files:
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On the course cluster download the data files:
 
<pre>
 
<pre>
 
wget https://molevol.mbl.edu/images/7/76/RB_BayesFactor_files.tar.gz
 
wget https://molevol.mbl.edu/images/7/76/RB_BayesFactor_files.tar.gz

Revision as of 11:41, 19 July 2015

Course materials by Tracy Heath, Michael Landis, and Sebastian Höhna on model selection and data partitioning in RevBayes


Lecture

Introduction to RevBayes slides are available on slideshare

Phylogenetic Inference using RevBayes: Model Selection & Data Partitioning

Source Code

RevBayes can be found on GitHub: https://github.com/revbayes/revbayes


Tutorial

The data files and Rev scripts can be found here: data files

On the course cluster download the data files:

wget https://molevol.mbl.edu/images/7/76/RB_BayesFactor_files.tar.gz

Uncompress the tutorial file directory:

tar xzf RB_BayesFactor_files.tar.gz

Navigate to the tutorial directory:

cd RB_tutorial_files

Add the RevBayes module:

module load revbayes

Execute RevBayes:

rb

The detailed lab practical document can be found here: tutorial PDF

Software