Difference between revisions of "RevBayes"

From MolEvol
(On the MBL Cluster)
Line 37: Line 37:
Download the data file to the data directory:
Download the data file to the data directory:
wget https://raw.githubusercontent.com/revbayes/revbayes_tutorial/master/RB_CTMC_Tutorial/data/primates_cytb.nex data/
wget http://bit.ly/1MiSitD data/

Revision as of 15:36, 21 July 2015

Course materials by Tracy Heath and Michael Landis on substitution models and phylogenetic reconstruction in RevBayes


Introduction to RevBayes slides are available on slideshare

Phylogenetic Inference using RevBayes: Substitution Models for Unconstrained Trees


Software downloads, tutorials, documentation, and other resources can be found on the RevBayes web page: http://revbayes.com

RevBayes source code can be found on GitHub: https://github.com/revbayes/revbayes


The detailed lab practical document can be found here: tutorial PDF

Data & Analysis Files

On the MBL Cluster

On the course cluster create a directory to run your analysis:

mkdir RB_tutorial
cd RB_tutorial

Make a directory for the data file:

mkdir data

Download the data file to the data directory:

wget http://bit.ly/1MiSitD data/

Add the bioware module:

module load bioware

Execute RevBayes:


Additional Software