RevBayes

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Revision as of 15:32, 21 July 2015 by Theath (talk | contribs)

Course materials by Tracy Heath and Michael Landis on model selection and data partitioning in RevBayes


Lecture

Introduction to RevBayes slides are available on slideshare

Phylogenetic Inference using RevBayes: Substitution Models for Unconstrained Trees

RevBayes

Software downloads, tutorials, documentation, and other resources can be found on the RevBayes web page: http://revbayes.com

RevBayes source code can be found on GitHub: https://github.com/revbayes/revbayes

Tutorial

The detailed lab practical document can be found here: tutorial PDF

Data & Analysis Files

On the MBL Cluster

On the course cluster create a directory to run your analysis:

mkdir RB_tutorial
cd RB_tutorial

Make a directory for the data file:

mkdir data

Download the data file to the data directory:

wget https://raw.githubusercontent.com/revbayes/revbayes_tutorial/master/RB_CTMC_Tutorial/data/primates_cytb.nex data/

Add the bioware module:

module load bioware

Execute RevBayes:

rb

Additional Software