Schedule
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Contents
First Week
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All morning sessions are in Rowe, afternoons will be in room G70 of the Loeb building
| Monday (23 July) |
Tuesday (24 July) |
Wednesday (25 July) |
Thursday (26 July) |
Friday (27 July) |
Saturday (28 July) | |
| 09:00-10:30 | Hillis (Intro) |
Lewis (Substitution models) |
Lewis (Bayesian intro) |
Bielawski (Codon models) |
Beerli (Coalescence) |
Felsenstein (Phylogenetics of quantitative characters) |
| 10:30-12:00 | TAs (Computer lab intro) Holder (Alignment) Alignment Lab |
Lewis (Likelihoods of trees) |
Lewis (Bayesian intro) |
Bielawski (Codon models) |
Beerli (Coalescence) |
Felsenstein (Historical Perspective of Phylogenetics) |
| 12:00-14:00 | Lunch break | |||||
| 14:00-15:30 | Pearson (Sequence databases) |
Swofford (Model selection) |
Huelsenbeck (Bayesian Phylogenetic Analysis: I, II, Supp. simwithdice.nex) |
Zwickl (Large scale ML inference) |
Kubatko (Species Tree Estimation) |
Meehan (Evolution of HIV) |
| 15:30-17:00 | Pearson (Sequence databases) |
Swofford (PAUP*) |
Huelsenbeck (Bayesian Phylogenetic Analysis: I, II, Supp.) |
Zwickl (GARLI lab) |
Kubatko (Species Tree Estimation) |
Meehan (Microbiome Evolution) |
| 17:00-19:00 | Dinner break | |||||
| 19:00-20:30 | Pearson (FASTA/BLAST lab) |
Holder (Topology testing]) |
Huelsenbeck MrBayes |
Bielawski ( PAML, JB_lab) |
Heath (Divergence time estimation) |
Course dinner/party Lobster Broil; starts at 6 PM |
| 20:30-22:00 | Pearson (FASTA/BLAST lab) |
Holder (Branch support and tests) |
Huelsenbeck MrBayes |
Bielawski ( PAML, JB_lab) |
Heath (BEAST) |
Course dinner/party Lobster Broil |
Second Week
| Monday (30 July) |
Tuesday (31 July) |
Wednesday (1 August) | ||||
| 09:00-10:30 | Sawyer (Applications of Molecular Evolution to Understanding Disease) |
Edwards (Multilocus phylogeography and phylogenetics) |
Zakon (Molecular Evolution of Sodium Channels) | |||
| 10:30-12:00 | Sawyer (Applications of Molecular Evolution to Understanding Disease) |
Edwards (Multilocus phylogeography and phylogenetics) |
Zakon (Molecular Evolution of Sodium Channels) | |||
| 12:00-14:00 | Lunch break | |||||
| 14:00-15:30 | Dunn (Phylogenomics: applications) |
Rokas (Genome evolution) |
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| 15:30-17:00 | Dunn (Phylogenomics: applications) |
Rokas (Genome evolution) |
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| 17:00-19:00 | Dinner break | |||||
| 19:00-20:30 | Beerli (Migrate tutorial and Lamarc tutorial) |
Kubatko and Edwards (Species Tree software) |
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| 20:30-22:00 | Beerli (Migrate tutorial and Lamarc tutorial) |
Kubatko and Edwards (Species Tree software) |
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