Difference between revisions of "Schedule 2019"

From MolEvol
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| align="left" width="20%" | '''09:00 - 10:30'''
 
| align="left" width="20%" | '''09:00 - 10:30'''
 
| align="left" width="20%" | [[Laura Eme|Laura Eme]]
 
| align="left" width="20%" | [[Laura Eme|Laura Eme]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Substitution models for proteins
 
|-
 
|-
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" | [[Laura Eme|Laura Eme]]
 
| align="left" width="20%" | [[Laura Eme|Laura Eme]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Multi-gene phylogenetics: methods & applications
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
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| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" | [[Bui Quang Minh|Bui Quang Minh]]
 
| align="left" width="20%" | [[Bui Quang Minh|Bui Quang Minh]]
| align="left" width="60%" |  
+
| align="left" width="60%" | IQ-TREE
 
|-
 
|-
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" | [[Bui Quang Minh|Bui Quang Minh]]
 
| align="left" width="20%" | [[Bui Quang Minh|Bui Quang Minh]]
| align="left" width="60%" |  
+
| align="left" width="60%" | IQ-TREE
 
|-
 
|-
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
+
| align="left" colspan="3" style="background:#E5E7EC" | Break
 
|-
 
|-
 
| align="left" width="20%" | '''19:00 - 22:00'''
 
| align="left" width="20%" | '''19:00 - 22:00'''
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| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Wednesday, August 7'''
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Wednesday, August 7'''
 
|-
 
|-
| align="left" width="20%" | '''09:00 - 10:30'''
+
| align="left" width="20%" | '''09:00 - 22:00'''
| align="left" width="20%" |
+
| align="left" width="20%" | '''Free Day'''
| align="left" width="60%" |
+
| align="left" width="60%" | Whale watching, Martha's Vineyard, sleep, ...
|-
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" |
 
| align="left" width="60%" |
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
|-
 
| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" |
 
| align="left" width="60%" |  
 
|-
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" |
 
| align="left" width="60%" |
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
|-
 
| align="left" width="20%" | '''19:00 - 20:30'''
 
| align="left" width="20%" |
 
| align="left" width="60%" |
 
|-
 
| align="left" width="20%" | '''20:30 - 22:00'''
 
| align="left" width="20%" |
 
| align="left" width="60%" |
 
 
|-
 
|-
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Thursday, August 8'''
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Thursday, August 8'''
 
|-
 
|-
 
| align="left" width="20%" | '''09:00 - 10:30'''
 
| align="left" width="20%" | '''09:00 - 10:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Peter Beerli|Beerli]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Introduction to The Coalescent
 
|-
 
|-
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" | '''10:30 - 12:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Laura Kubatko|Kubatko]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Species Tree Estimation
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
|-
 
|-
 
| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" | '''14:00 - 15:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Laura Kubatko|Kubatko]]/[[David Swofford|Swofford]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Species Tree Lab I
 
|-
 
|-
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" | '''15:30 - 17:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Peter Beerli|Beerli]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Extension of the basic coalescent
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
|-
 
|-
 
| align="left" width="20%" | '''19:00 - 20:30'''
 
| align="left" width="20%" | '''19:00 - 20:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Peter Beerli|Beerli]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Migrate tutorial
 
|-
 
|-
 
| align="left" width="20%" | '''20:30 - 22:00'''
 
| align="left" width="20%" | '''20:30 - 22:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Peter Beerli|Beerli]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Migrate tutorial
 
|-
 
|-
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Friday, August 9'''
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Friday, August 9'''
 
|-
 
|-
 
| align="left" width="20%" | '''09:00 - 10:30'''
 
| align="left" width="20%" | '''09:00 - 10:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Lacey Knowles|Knowles]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Evolutionary applications of genomic data
 
|-
 
|-
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" | '''10:30 - 12:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Lacey Knowles|Knowles]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Evolutionary applications of genomic data
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
|-
 
|-
 
| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" | '''14:00 - 15:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Cecile Ane|Cecile Ane]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Network models
 
|-
 
|-
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" | '''15:30 - 17:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Cecile Ane|Cecile Ane]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Network models
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
|-
 
|-
 
| align="left" width="20%" | '''19:00 - 20:30'''
 
| align="left" width="20%" | '''19:00 - 20:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Scott Edwards|Edwards]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Multilocus phylogeography and phylogenetics
 
|-
 
|-
 
| align="left" width="20%" | '''20:30 - 22:00'''
 
| align="left" width="20%" | '''20:30 - 22:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Scott Edwards|Edwards]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Multilocus phylogeography and phylogenetics
 
|-
 
|-
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Saturday, August 10'''
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Saturday, August 10'''
 
|-
 
|-
 
| align="left" width="20%" | '''09:00 - 10:30'''
 
| align="left" width="20%" | '''09:00 - 10:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Michael Landis|Landis]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Phylogenetics with RevBayes
 
|-
 
|-
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" | '''10:30 - 12:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Michael Landis|Landis]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Phylogenetics with RevBayes
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
|-
 
|-
 
| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" | '''14:00 - 15:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Tracy Heath|Heath]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Divergence time estimation w/ RevBayes
 
|-
 
|-
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" | '''15:30 - 17:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Tracy Heath|Heath]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Divergence time estimation w/ RevBayes
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
|-
 
|-
 
| align="left" width="20%" | '''19:00 - 20:30'''
 
| align="left" width="20%" | '''19:00 - 20:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Ben Evans|Evans]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Insights into how "important things" evolve
 
|-
 
|-
 
| align="left" width="20%" | '''20:30 - 22:00'''
 
| align="left" width="20%" | '''20:30 - 22:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | Graduation ceremony
| align="left" width="60%" |  
+
| align="left" width="60%" | Open lab/discussion
 
|-
 
|-
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Sunday, August 11'''
 
| align="center" colspan="3"  style="background:SteelBlue;color:white" | '''Sunday, August 11'''
 
|-
 
|-
 
| align="left" width="20%" | '''09:00 - 10:30'''
 
| align="left" width="20%" | '''09:00 - 10:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | [[Mark Holder|Holder]]
| align="left" width="60%" |  
+
| align="left" width="60%" | Scientific ethics, tree testing, Open Tree of Life
 
|-
 
|-
 
| align="left" width="20%" | '''10:30 - 12:00'''
 
| align="left" width="20%" | '''10:30 - 12:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | Workshop Faculty
| align="left" width="60%" |  
+
| align="left" width="60%" | Participant Discussions
 
|-
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
| align="left" colspan="3" style="background:#E5E7EC" | Lunch Break
 
|-
 
|-
 
| align="left" width="20%" | '''14:00 - 15:30'''
 
| align="left" width="20%" | '''14:00 - 15:30'''
| align="left" width="20%" |  
+
| align="left" width="20%" | Open lab
 
| align="left" width="60%" |  
 
| align="left" width="60%" |  
 
|-
 
|-
 
| align="left" width="20%" | '''15:30 - 17:00'''
 
| align="left" width="20%" | '''15:30 - 17:00'''
| align="left" width="20%" |  
+
| align="left" width="20%" | Open lab
| align="left" width="60%" |
 
|-
 
| align="left" colspan="3" style="background:#E5E7EC" | Dinner Break
 
|-
 
| align="left" width="20%" | '''19:00 - 20:30'''
 
| align="left" width="20%" |
 
| align="left" width="60%" |
 
|-
 
| align="left" width="20%" | '''20:30 - 22:00'''
 
| align="left" width="20%" |
 
 
| align="left" width="60%" |  
 
| align="left" width="60%" |  
 
|-
 
|-
 
|}
 
|}

Revision as of 16:38, 15 October 2018

Thursday, August 1
17:00 - 22:00 Welcome & opening reception in Swope
Friday, August 2
09:00 - 10:30 Holder Welcome & 1 min Student Presentations
10:30 - 12:00 who? Introduction to phylogenetics
Lunch Break
14:00 - 15:30 who? Phylogenomics & methods
15:30 - 17:00 who? Phylogenomics & methods
Dinner Break
19:00 - 20:30 who? Intro computer lab
20:30 - 22:00 who? Alignment lab
Saturday, August 3
09:00 - 10:30 Lewis Intro to maximum likelihood
10:30 - 12:00 Lewis Intro to maximum likelihood
Lunch Break
14:00 - 15:30 Swofford Model selection
15:30 - 17:00 Swofford Model-selection tutorial, PAUP
Dinner Break
19:00 - 20:30 McTavish Maximum likelihood tree searching
20:30 - 22:00 McTavish Ascertainment bias & partition models
Sunday, August 4
09:00 - 10:30 Lewis Bayesian phylogenetics
10:30 - 12:00 Lewis Bayesian phylogenetics
Lunch Break
14:00 - 15:30 Huelsenbeck Simulation lab++
15:30 - 17:00 Huelsenbeck Why I like ML & Bayes
Dinner Break
19:00 - 20:30 Landis Graphical models and RevBayes
20:30 - 22:00 Heath Divergence time estimation
Monday, August 5
09:00 - 10:30 Bielawski Drift, selection & codon models
10:30 - 12:00 Bielawski Statistical analyses
Lunch Break
14:00 - 15:30 Chang Protein evolution & ancestral reconstruction
15:30 - 17:00 Chang Adaptive protein evolution
Dinner Break
19:00 - 20:30 Bielawski PAML lab, lab slides
20:30 - 22:00 Bielawski Additional resources, advanced lab
Tuesday, August 6
09:00 - 10:30 Laura Eme Substitution models for proteins
10:30 - 12:00 Laura Eme Multi-gene phylogenetics: methods & applications
Lunch Break
14:00 - 15:30 Bui Quang Minh IQ-TREE
15:30 - 17:00 Bui Quang Minh IQ-TREE
Break
19:00 - 22:00 Course Dinner Party Swope Terrace
Wednesday, August 7
09:00 - 22:00 Free Day Whale watching, Martha's Vineyard, sleep, ...
Thursday, August 8
09:00 - 10:30 Beerli Introduction to The Coalescent
10:30 - 12:00 Kubatko Species Tree Estimation
Lunch Break
14:00 - 15:30 Kubatko/Swofford Species Tree Lab I
15:30 - 17:00 Beerli Extension of the basic coalescent
Dinner Break
19:00 - 20:30 Beerli Migrate tutorial
20:30 - 22:00 Beerli Migrate tutorial
Friday, August 9
09:00 - 10:30 Knowles Evolutionary applications of genomic data
10:30 - 12:00 Knowles Evolutionary applications of genomic data
Lunch Break
14:00 - 15:30 Cecile Ane Network models
15:30 - 17:00 Cecile Ane Network models
Dinner Break
19:00 - 20:30 Edwards Multilocus phylogeography and phylogenetics
20:30 - 22:00 Edwards Multilocus phylogeography and phylogenetics
Saturday, August 10
09:00 - 10:30 Landis Phylogenetics with RevBayes
10:30 - 12:00 Landis Phylogenetics with RevBayes
Lunch Break
14:00 - 15:30 Heath Divergence time estimation w/ RevBayes
15:30 - 17:00 Heath Divergence time estimation w/ RevBayes
Dinner Break
19:00 - 20:30 Evans Insights into how "important things" evolve
20:30 - 22:00 Graduation ceremony Open lab/discussion
Sunday, August 11
09:00 - 10:30 Holder Scientific ethics, tree testing, Open Tree of Life
10:30 - 12:00 Workshop Faculty Participant Discussions
Lunch Break
14:00 - 15:30 Open lab
15:30 - 17:00 Open lab