Schedule 2019

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Thursday, August 1
17:00 - 22:00 Welcome & opening reception in Swope
Friday, August 2
09:00 - 10:30 Holder Welcome & 1 min Student Presentations
10:30 - 12:00 who? Introduction to phylogenetics
Lunch Break
14:00 - 15:30 who? Phylogenomics & methods
15:30 - 17:00 who? Phylogenomics & methods
Dinner Break
19:00 - 20:30 who? Intro computer lab
20:30 - 22:00 who? Alignment lab
Saturday, August 3
09:00 - 10:30 Lewis Intro to maximum likelihood
10:30 - 12:00 Lewis Intro to maximum likelihood
Lunch Break
14:00 - 15:30 Swofford Model selection
15:30 - 17:00 Swofford Model-selection tutorial, PAUP
Dinner Break
19:00 - 20:30 McTavish Maximum likelihood tree searching
20:30 - 22:00 McTavish Ascertainment bias & partition models
Sunday, August 4
09:00 - 10:30 Lewis Bayesian phylogenetics
10:30 - 12:00 Lewis Bayesian phylogenetics
Lunch Break
14:00 - 15:30 Huelsenbeck Simulation lab++
15:30 - 17:00 Huelsenbeck Why I like ML & Bayes
Dinner Break
19:00 - 20:30 Landis Graphical models and RevBayes
20:30 - 22:00 Heath Divergence time estimation
Monday, August 5
09:00 - 10:30 Bielawski Drift, selection & codon models
10:30 - 12:00 Bielawski Statistical analyses
Lunch Break
14:00 - 15:30 Chang Protein evolution & ancestral reconstruction
15:30 - 17:00 Chang Adaptive protein evolution
Dinner Break
19:00 - 20:30 Bielawski PAML lab, lab slides
20:30 - 22:00 Bielawski Additional resources, advanced lab
Tuesday, August 6
09:00 - 10:30 Laura Eme Substitution models for proteins
10:30 - 12:00 Laura Eme Multi-gene phylogenetics: methods & applications
Lunch Break
14:00 - 15:30 Bui Quang Minh IQ-TREE
15:30 - 17:00 Bui Quang Minh IQ-TREE
Break
19:00 - 22:00 Course Dinner Party Swope Terrace
Wednesday, August 7
09:00 - 22:00 Free Day Whale watching, Martha's Vineyard, sleep, ...
Thursday, August 8
09:00 - 10:30 Beerli Introduction to The Coalescent
10:30 - 12:00 Kubatko Species Tree Estimation
Lunch Break
14:00 - 15:30 Kubatko/Swofford Species Tree Lab I
15:30 - 17:00 Beerli Extension of the basic coalescent
Dinner Break
19:00 - 20:30 Beerli Migrate tutorial
20:30 - 22:00 Beerli Migrate tutorial
Friday, August 9
09:00 - 10:30 Knowles Evolutionary applications of genomic data
10:30 - 12:00 Knowles Evolutionary applications of genomic data
Lunch Break
14:00 - 15:30 Claudia Solis-Lemus Network models
15:30 - 17:00 Claudia Solis-Lemus Network models
Dinner Break
19:00 - 20:30 Edwards Multilocus phylogeography and phylogenetics
20:30 - 22:00 Edwards Multilocus phylogeography and phylogenetics
Saturday, August 10
09:00 - 10:30 Landis Phylogenetics with RevBayes
10:30 - 12:00 Landis Phylogenetics with RevBayes
Lunch Break
14:00 - 15:30 Heath Divergence time estimation w/ RevBayes
15:30 - 17:00 Heath Divergence time estimation w/ RevBayes
Dinner Break
19:00 - 20:30 Evans Insights into how "important things" evolve
20:30 - 22:00 Graduation ceremony Open lab/discussion
Sunday, August 11
09:00 - 10:30 Holder Scientific ethics, tree testing, Open Tree of Life
10:30 - 12:00 Workshop Faculty Participant Discussions
Lunch Break
14:00 - 15:30 Open lab
15:30 - 17:00 Open lab