Difference between revisions of "Software"

From MolEvol
(Phylogenetic tree building and analysis)
(Phylogenetic tree building and analysis)
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** [http://bioinformatics.publichealth.uga.edu/SpeciesTreeAnalysis/index.php Species tree web server]
 
** [http://bioinformatics.publichealth.uga.edu/SpeciesTreeAnalysis/index.php Species tree web server]
 
* [http://www.mrbayes.net MrBayes]
 
* [http://www.mrbayes.net MrBayes]
 +
* [http://statgen.ncsu.edu/thorne/multidivtime.html/ multidivtime]
 
* [http://abacus.gene.ucl.ac.uk/software/paml.html PAML]
 
* [http://abacus.gene.ucl.ac.uk/software/paml.html PAML]
 
* [http://people.sc.fsu.edu/~dswofford/paup_test PAUP*]
 
* [http://people.sc.fsu.edu/~dswofford/paup_test PAUP*]

Revision as of 10:37, 24 July 2013

Alignment

Phylogenetic tree building and analysis

Other

  • Bugs in a Box: A Macintosh program and its (python) source code to show the coalescence process (but still does not draw a tree).

Pipelines

Population analysis

Similarity searching