Difference between revisions of "Software"

From MolEvol
(Phylogenetic tree building and analysis)
(Phylogenetic tree building and analysis)
Line 36: Line 36:
 
* [http://www.phylobayes.org PhyloBayes]
 
* [http://www.phylobayes.org PhyloBayes]
 
*[http://sco.h-its.org/exelixis/software.html RAxML (and many other programs)]
 
*[http://sco.h-its.org/exelixis/software.html RAxML (and many other programs)]
 +
* [http://sourceforge.net/projects/revbayes/ RevBayes]
 
*[http://kiwi.cs.dal.ca/Software/RSPR rSPR]
 
*[http://kiwi.cs.dal.ca/Software/RSPR rSPR]
 
*[http://kiwi.cs.dal.ca/Software/SPRSupertrees SPRSupertrees]
 
*[http://kiwi.cs.dal.ca/Software/SPRSupertrees SPRSupertrees]

Revision as of 10:40, 24 July 2013

Alignment

Phylogenetic tree building and analysis

Other

  • Bugs in a Box: A Macintosh program and its (python) source code to show the coalescence process (but still does not draw a tree).

Pipelines

Population analysis

Similarity searching